AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations
نویسندگان
چکیده
منابع مشابه
AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations
Networks often contain regions of tightly connected nodes, or clusters, that highlight their shared relationships. An effective way to create a visual summary of a network is to identify clusters and annotate them with an enclosing shape and a summarizing label. Cytoscape provides the ability to annotate a network with shapes and labels, however these annotations must be created manually one at...
متن کاملSocial Network: a Cytoscape app for visualizing co-publication networks.
Networks that represent connections between individuals can be valuable analytic tools. The Social Network Cytoscape app is capable of creating a visual summary of connected individuals automatically. It does this by representing relationships as networks where each node denotes an individual and an edge linking two individuals represents a connection. The app focuses on creating visual summari...
متن کاملeXamine: a Cytoscape app for exploring annotated modules in networks
• A submitted manuscript is the author's version of the article upon submission and before peer-review. There can be important differences between the submitted version and the official published version of record. People interested in the research are advised to contact the author for the final version of the publication, or visit the DOI to the publisher's website. • The final author version ...
متن کاملSocial Network: a Cytoscape app for visualizing co-authorship networks
Networks that represent connections between individuals can be valuable analytic tools. The Social Network Cytoscape app is capable of creating a visual summary of connected individuals automatically. It does this by representing relationships as networks where each node denotes an individual and an edge linking two individuals represents a connection. The app focuses on creating visual summari...
متن کاملDevelopment and use of the Cytoscape app GFD-Net for measuring semantic dissimilarity of gene networks
Gene networks are one of the main computational models used to study the interaction between different elements during biological processes being widely used to represent gene-gene, or protein-protein interaction complexes. We present GFD-Net, a Cytoscape app for visualizing and analyzing the functional dissimilarity of gene networks.
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: F1000Research
سال: 2016
ISSN: 2046-1402
DOI: 10.12688/f1000research.9090.1